/*
 * Copyright 2006-2018 The MZmine 2 Development Team
 * 
 * This file is part of MZmine 2.
 * 
 * MZmine 2 is free software; you can redistribute it and/or modify it under the terms of the GNU
 * General Public License as published by the Free Software Foundation; either version 2 of the
 * License, or (at your option) any later version.
 * 
 * MZmine 2 is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without
 * even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
 * General Public License for more details.
 * 
 * You should have received a copy of the GNU General Public License along with MZmine 2; if not,
 * write to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301
 * USA
 */

package net.sf.mzmine.modules.peaklistmethods.alignment.hierarchical;

import java.util.logging.Logger;

public class TriangularMatrixFloat extends TriangularMatrix {

  private Logger logger = Logger.getLogger(this.getClass().getName());

  // private final float[] list;
  private final LargeArrayFloat list;

  public TriangularMatrixFloat(int dimension) {

    list = new LargeArrayFloat(sumFormula(dimension));
    this.setDimension(dimension);
  }

  @Override
  public double set(int row, int column, double value) {

    long listIndex = getListIndex(row, column);
    float oldValue = list.get(listIndex);
    list.set(listIndex, (float) value);

    return oldValue;
  }

  @Override
  public double get(int row, int column) {

    return list.get(getListIndex(row, column));
  }

  @Override
  public void printVector() {
    logger.info(list.toString());
  }

}
